// Tutorial //

How To Secure Nginx with Let's Encrypt on Ubuntu 16.04

Published on March 30, 2016 · Updated on October 27, 2017
Default avatar
By Mitchell Anicas
Developer and author at DigitalOcean.
How To Secure Nginx with Let's Encrypt on Ubuntu 16.04
Not using Ubuntu 16.04?Choose a different version or distribution.


Let’s Encrypt is a Certificate Authority (CA) that provides an easy way to obtain and install free TLS/SSL certificates, thereby enabling encrypted HTTPS on web servers. It simplifies the process by providing a software client, Certbot, that attempts to automate most (if not all) of the required steps. Currently, the entire process of obtaining and installing a certificate is fully automated on both Apache and Nginx.

In this tutorial, you will use Certbot to obtain a free SSL certificate for Nginx on Ubuntu 16.04 and set up your certificate to renew automatically.

This tutorial uses the default Nginx configuration file instead of a separate server block file. We recommend creating new Nginx server block files for each domain because it helps to avoid some common mistakes and maintains the default files as a fallback configuration as intended. If you want to set up SSL using server blocks instead, you can follow this Nginx server blocks with Let’s Encrypt tutorial.


To follow this tutorial, you will need:

  • One Ubuntu 16.04 server set up by following this initial server setup for Ubuntu 16.04 tutorial, including a sudo non-root user and a firewall.
  • A fully registered domain name. This tutorial will use example.com throughout. You can purchase a domain name on Namecheap, get one for free on Freenom, or use the domain registrar of your choice.
  • Both of the following DNS records set up for your server. You can follow this hostname tutorial for details on how to add them.
    • An A record with example.com pointing to your server’s public IP address.
    • An A record with www.example.com pointing to your server’s public IP address.
  • Nginx installed by following How To Install Nginx on Ubuntu 16.04.

Step 1 — Installing Certbot

The first step to using Let’s Encrypt to obtain an SSL certificate is to install the Certbot software on your server.

Certbot is in very active development, so the Certbot packages provided by Ubuntu tend to be outdated. However, the Certbot developers maintain a Ubuntu software repository with up-to-date versions, so we’ll use that repository instead.

First, add the repository.

  1. sudo add-apt-repository ppa:certbot/certbot

You’ll need to press ENTER to accept. Then, update the package list to pick up the new repository’s package information.

  1. sudo apt-get update

And finally, install Certbot’s Nginx package with apt-get.

  1. sudo apt-get install python-certbot-nginx

Certbot is now ready to use, but in order for it to configure SSL for Nginx, we need to verify some of Nginx’s configuration.

Step 2 — Setting up Nginx

Certbot can automatically configure SSL for Nginx, but it needs to be able to find the correct server block in your config. It does this by looking for a server_name directive that matches the domain you’re requesting a certificate for.

If you’re starting out with a fresh Nginx install, you can update the default config file. Open it with nano or your favorite text editor.

  1. sudo nano /etc/nginx/sites-available/default

Find the existing server_name line and replace the underscore, _, with your domain name:

. . .
server_name example.com www.example.com;
. . .

Save the file and quit your editor.

Then, verify the syntax of your configuration edits.

  1. sudo nginx -t

If you get any errors, reopen the file and check for typos, then test it again.

Once your configuration’s syntax is correct, reload Nginx to load the new configuration.

  1. sudo systemctl reload nginx

Certbot will now be able to find the correct server block and update it. Next, we’ll update our firewall to allow HTTPS traffic.

Step 3 — Allowing HTTPS Through the Firewall

If you have the ufw firewall enabled, as recommended by the prerequisite guides, you’ll need to adjust the settings to allow for HTTPS traffic. Luckily, Nginx registers a few profiles with ufw upon installation.

You can see the current setting by typing:

  1. sudo ufw status

It will probably look like this, meaning that only HTTP traffic is allowed to the web server:

Status: active To Action From -- ------ ---- OpenSSH ALLOW Anywhere Nginx HTTP ALLOW Anywhere OpenSSH (v6) ALLOW Anywhere (v6) Nginx HTTP (v6) ALLOW Anywhere (v6)

To additionally let in HTTPS traffic, we can allow the Nginx Full profile and then delete the redundant Nginx HTTP profile allowance:

  1. sudo ufw allow 'Nginx Full'
  2. sudo ufw delete allow 'Nginx HTTP'

Your status should look like this now:

  1. sudo ufw status
Status: active To Action From -- ------ ---- OpenSSH ALLOW Anywhere Nginx Full ALLOW Anywhere OpenSSH (v6) ALLOW Anywhere (v6) Nginx Full (v6) ALLOW Anywhere (v6)

We’re now ready to run Certbot and fetch our certificates.

Step 4 — Obtaining an SSL Certificate

Certbot provides a variety of ways to obtain SSL certificates, through various plugins. The Nginx plugin will take care of reconfiguring Nginx and reloading the config whenever necessary:

  1. sudo certbot --nginx -d example.com -d www.example.com

This runs certbot with the --nginx plugin, using -d to specify the names we’d like the certificate to be valid for.

If this is your first time running certbot, you will be prompted to enter an email address and agree to the terms of service. After doing so, certbot will communicate with the Let’s Encrypt server, then run a challenge to verify that you control the domain you’re requesting a certificate for.

If that’s successful, certbot will ask how you’d like to configure your HTTPS settings.

Please choose whether or not to redirect HTTP traffic to HTTPS, removing HTTP access. ------------------------------------------------------------------------------- 1: No redirect - Make no further changes to the webserver configuration. 2: Redirect - Make all requests redirect to secure HTTPS access. Choose this for new sites, or if you're confident your site works on HTTPS. You can undo this change by editing your web server's configuration. ------------------------------------------------------------------------------- Select the appropriate number [1-2] then [enter] (press 'c' to cancel):

Select your choice then hit ENTER. The configuration will be updated, and Nginx will reload to pick up the new settings. certbot will wrap up with a message telling you the process was successful and where your certificates are stored:

IMPORTANT NOTES: - Congratulations! Your certificate and chain have been saved at /etc/letsencrypt/live/example.com/fullchain.pem. Your cert will expire on 2017-10-23. To obtain a new or tweaked version of this certificate in the future, simply run certbot again with the "certonly" option. To non-interactively renew *all* of your certificates, run "certbot renew" - Your account credentials have been saved in your Certbot configuration directory at /etc/letsencrypt. You should make a secure backup of this folder now. This configuration directory will also contain certificates and private keys obtained by Certbot so making regular backups of this folder is ideal. - If you like Certbot, please consider supporting our work by: Donating to ISRG / Let's Encrypt: https://letsencrypt.org/donate Donating to EFF: https://eff.org/donate-le

Your certificates are downloaded, installed, and loaded. Try reloading your website using https:// and notice your browser’s security indicator. It should indicate that the site is properly secured, usually with a green lock icon. If you test your server using the SSL Labs Server Test, it will get an A grade.

Let’s finish by testing the renewal process.

Step 5 — Verifying Certbot Auto-Renewal

Let’s Encrypt’s certificates are only valid for ninety days. This is to encourage users to automate their certificate renewal process. The certbot package we installed takes care of this for us by running ‘certbot renew’ twice a day via a systemd timer. On non-systemd distributions this functionality is provided by a script placed in /etc/cron.d. This task runs twice a day and will renew any certificate that’s within thirty days of expiration.

To test the renewal process, you can do a dry run with certbot:

  1. sudo certbot renew --dry-run

If you see no errors, you’re all set. When necessary, Certbot will renew your certificates and reload Nginx to pick up the changes. If the automated renewal process ever fails, Let’s Encrypt will send a message to the email you specified, warning you when your certificate is about to expire.


In this tutorial, you installed the Let’s Encrypt client certbot, downloaded SSL certificates for your domain, configured Nginx to use these certificates, and set up automatic certificate renewal. If you have further questions about using Certbot, their documentation is a good place to start.

Want to learn more? Join the DigitalOcean Community!

Join our DigitalOcean community of over a million developers for free! Get help and share knowledge in our Questions & Answers section, find tutorials and tools that will help you grow as a developer and scale your project or business, and subscribe to topics of interest.

Sign up
About the authors
Default avatar
Developer and author at DigitalOcean.

Default avatar
senior technical writer

hi! i write do.co/docs now, but i used to be the senior tech editor publishing tutorials here in the community.

Still looking for an answer?

Was this helpful?

If you plan on actually doing HTTPS redirect and auto-renew your certificate, I’d suggest setting up your :80 server like:

server {
	listen 80;
	listen [::]:80;
	server_name example.tld www.example.tld;
	root /var/www/example.tld;

	# Let's Encrypt
	location ~/.well-known {
		allow all;

	# Redirection to HTTPS
	location / {
		rewrite ^ https://$server_name$request_uri permanent;

In your ssl-params.conf (/etc/nginx/snippets/ssl-params.conf) you recommend this setting:

add_header X-Frame-Options DENY;

This may cause some apps to fail (e.g. some wide spread wordpress plugins)

A good compromise for usability and security should be this setting:

add_header X-Frame-Options SAMEORIGIN;

Hello, I followed this tutorial with a fresh Ubuntu 16.04 LEMP Installation. It does not work.

The way to get it to work is when this tutorial references the file path/name “/etc/nginx/sites-available/default”, replace the “default” with “digitalocean” as for some reason the Nginx out of the box is set to use this config. Hence

etc/nginx/sites-available/default > etc/nginx/sites-available/digitalocean

I hope I can save someone the two hours that I spent!

In case it helps someone else, one issue I ran into while using these instructions with the “Ubuntu LEMP on 16.04” distribution is that its active server file is /etc/nginx/sites-enabled/digitalocean (symlinked to /etc/nginx/sites-available/digitalocean). Modifying /etc/nginx/sites-available/default would thus have no effect on the live server.

Simple fix:

    sudo rm /etc/nginx/sites-enabled/digitalocean
    sudo ln -s /etc/nginx/sites-available/default /etc/nginx/sites-enabled

In case it helps someone else, one issue I ran into while using these instructions with the “Ubuntu LEMP on 16.04” distribution is that its active server file is /etc/nginx/sites-enabled/digitalocean (symlinked to /etc/nginx/sites-available/digitalocean). Modifying /etc/nginx/sites-available/default would thus have no effect on the live server.

Simple fix:

    sudo rm /etc/nginx/sites-enabled/digitalocean
    sudo ln -s /etc/nginx/sites-available/default /etc/nginx/sites-enabled

When using virtual hosts, I’ve found I needed to also add the server_name directive under the SSL listen 443 lines.

I did every thing. But not taking A+ rating. It’s A. How can I fix it?

I did every thing. But not taking A+ rating. It’s A. How can I fix it?

in ‘Add to SSL server block’, the nginx conf file:

    location ~ /.well-known {
            allow all;

is wrong. The right is:

    location ^~ /\.well-known {
            allow all;

take care the ^ and \ above.

I’m having a problem. I was able to setup ssl, but my site now only shows the “Welcome to nginx!” page. (Before I setup ssl, I did see my files) I assumed the root was changed to /usr/share/nginx/html I’m a noob so I have no clue what to do. Placing “root /var/www/html” in the config file doesn’t do anything. Running Ubuntu LEMP on 16.04. Let me know if you need more info.